Job failed : Error in R process: simpleError : transfer closed with outstanding read data remaining

Romain

When i try to generate R code thanks to Recipes, i alaways get the following error:

Job failed : Error in R process: simpleError : transfer closed with outstanding read data remaining

Please find the logs below:

[16:54:50] [INFO] [dku.utils]  - > commandes_05_09_2017 <- dkuReadDataset("Commandes_05_09_2017")
[16:54:50] [INFO] [dku.utils]  - [1] "********** R code failed **********"
[16:54:50] [INFO] [dku.utils]  - [1] "Error evaluating R code:  Error in curl::curl_fetch_memory(url, handle = handle): transfer closed with outstanding read data remaining\n"
[16:54:50] [INFO] [com.dataiku.dip.dataflow.exec.r.RRecipeRunner] - Error file found, trying to throw it: /home/dataiku/dss/jobs/FLOW/Build_commandes_2017-10-25T16-54-47.936/compute_commandes_NP/out-R-zmcY2oeF52BM/error.json
[16:54:50] [INFO] [dku.flow.activity] - Run thread failed for activity compute_commandes_NP
com.dataiku.common.server.APIError$SerializedErrorException: Error in R process: simpleError :  transfer closed with outstanding read data remaining
	at com.dataiku.dip.dataflow.exec.AbstractCodeBasedActivityRunner.execute(AbstractCodeBasedActivityRunner.java:304)
	at com.dataiku.dip.dataflow.exec.AbstractCodeBasedActivityRunner.execute(AbstractCodeBasedActivityRunner.java:231)
	at com.dataiku.dip.recipes.code.r.AbstractRRecipeRunner.executeScript(AbstractRRecipeRunner.java:31)
	at com.dataiku.dip.dataflow.exec.r.RRecipeRunner.run(RRecipeRunner.java:36)
	at com.dataiku.dip.dataflow.jobrunner.ActivityRunner$FlowRunnableThread.run(ActivityRunner.java:353)
[16:54:51] [INFO] [dku.flow.activity] running compute_commandes_NP - activity is finished
[16:54:51] [ERROR] [dku.flow.activity] running compute_commandes_NP - Activity failed
com.dataiku.common.server.APIError$SerializedErrorException: Error in R process: simpleError :  transfer closed with outstanding read data remaining
	at com.dataiku.dip.dataflow.exec.AbstractCodeBasedActivityRunner.execute(AbstractCodeBasedActivityRunner.java:304)
	at com.dataiku.dip.dataflow.exec.AbstractCodeBasedActivityRunner.execute(AbstractCodeBasedActivityRunner.java:231)
	at com.dataiku.dip.recipes.code.r.AbstractRRecipeRunner.executeScript(AbstractRRecipeRunner.java:31)
	at com.dataiku.dip.dataflow.exec.r.RRecipeRunner.run(RRecipeRunner.java:36)
	at com.dataiku.dip.dataflow.jobrunner.ActivityRunner$FlowRunnableThread.run(ActivityRunner.java:353)
[16:54:51] [INFO] [dku.flow.activity] running compute_commandes_NP - Executing default post-activity lifecycle hook
[16:54:51] [INFO] [dku.flow.activity] running compute_commandes_NP - Removing samples for FLOW.commandes
[16:54:51] [INFO] [dku.flow.activity] running compute_commandes_NP - Removing samples for FLOW.validations
[16:54:51] [INFO] [dku.flow.activity] running compute_commandes_NP - Removing samples for FLOW.geolocalisation
[16:54:51] [INFO] [dku.flow.activity] running compute_commandes_NP - Done post-activity tasks

Do you have some ideas to fix it?

Thanks!

jereze

Hi,

The dataiku library cannot communicate with the backend. How did you install R? With the installation script?

Can you please provide a job diagnostic so that we can investigate?

Jeremy

Romain

Yes, i installed R with the installation script on a virtual machine VirtualBox.
I v got all the job diagnosis.
How do you want me to transfer it?

jereze

On the conversation module of the website (Intercom). Thanks.